AI-Assisted Single-Cell Data Analysis Using MCP and Scanpy 🧬🤖
Автор: BioinfQuests
Загружено: 2026-01-28
Просмотров: 37
Описание:
🧬 In this video, we explore a real bioinformatics use case: AI-assisted single-cell data analysis using Model Context Protocol (MCP) and Scanpy.
We build and use a custom MCP server that exposes Scanpy-based analysis tools, enabling an AI assistant to perform and guide single-cell quality control and data exploration 🤖📊.
🔹 Topics covered in this video:
🧪 Overview of single-cell data analysis
🧬 Using Scanpy as the analysis backend
🛠️ Building an MCP server for single-cell workflows
📊 Exposing single-cell QC and analysis steps as MCP tools
🤖 Running analysis via an AI assistant
🔍 Interpreting single-cell QC metrics with AI support
💡 How MCP enables reusable single-cell analysis workflows
This video demonstrates how MCP can be applied to *complex, real-world bioinformatics analyses* such as single-cell RNA-seq 🚀.
📌 GitHub repository (code & tutorials):
👉 https://github.com/prpanigrahi/single...
This video is part of the playlist:
🎥 Model Context Protocol (MCP) for Bioinformatics
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