GenStore: In-Storage Filtering for High-Performance and Energy-Efficient Genome Analysis

Описание: GenStore: In-Storage Filtering of Genomic Data for High-Performance and Energy-Efficient Genome Analysis
Presenter: Nika Mansouri Ghiasi

ISVLSI 2022 Special Session on Processing-in-Memory
Date: July 4, 2022

Slides (pptx): https://safari.ethz.ch/safari_public_...
Slides (pdf): https://safari.ethz.ch/safari_public_...
Paper/s: https://people.inf.ethz.ch/omutlu/pub...

Recommended Readings:
====================
A Modern Primer on Processing in Memory
https://people.inf.ethz.ch/omutlu/pub...

Processing Data Where It Makes Sense: Enabling In-Memory Computation
https://people.inf.ethz.ch/omutlu/pub...

Processing-in-Memory: A Workload-Driven Perspective
https://people.inf.ethz.ch/omutlu/pub...

Benchmarking a New Paradigm: An Experimental Analysis of a Real Processing-in-Memory Architecture
https://people.inf.ethz.ch/omutlu/pub...

Benchmarking Memory-Centric Computing Systems: Analysis of Real Processing-in-Memory Hardware
https://people.inf.ethz.ch/omutlu/pub...

SIMDRAM: An End-to-End Framework for Bit-Serial SIMD Computing in DRAM
https://people.inf.ethz.ch/omutlu/pub...

DAMOV: A New Methodology and Benchmark Suite for Evaluating Data Movement Bottlenecks
https://people.inf.ethz.ch/omutlu/pub...

Intelligent Architectures for Intelligent Computing Systems
https://people.inf.ethz.ch/omutlu/pub...

RowHammer: A Retrospective
https://people.inf.ethz.ch/omutlu/pub...

RECOMMENDED LECTURE VIDEOS & PLAYLISTS:
========================================
P&S Data-Centric Architectures: Fundamentally Improving Performance and Energy (Fall 2022)
   • Livestream - P&S Data-Centric Architecture...  

P&S Programming Heterogeneous Computing Systems with GPUs and other Accelerators (Fall 2022)
   • Livestream - P&S Programming Heterogeneous...  

Computer Architecture Fall 2022 Lectures Playlist:
   • Livestream - Computer Architecture - ETH Z...  

Digital Design and Computer Architecture Spring 2022 Livestream Lectures Playlist:
   • Livestream - Digital Design and Computer A...  

Featured Lectures:
   • Onur Mutlu - Supercomputing Frontiers Euro...  

Interview with Professor Onur Mutlu:
   • Interview with Onur Mutlu @ ISCA 2019 on c...  

The Story of RowHammer Lecture:
   • The Story of Rowhammer - Secure Hardware, ...  

Accelerating Genome Analysis Lecture:
   • Accelerating Genome Analysis: A Primer on ...  

Memory-Centric Computing Systems Tutorial at IEDM 2021:
   • IEDM 2020 Tutorial: Memory-Centric Computi...  

Intelligent Architectures for Intelligent Machines Lecture:
   • Onur Mutlu - Invited Talk @ Seoul National...