EMBOSS-PEPSTATS | Protein Physiochemical Properties Calculation | Lecture 44 | Dr. Muhammad Naveed

Описание: What is emboss bioinformatics?
EMBOSS is a free open source software analysis package developed for the needs of the molecular biology and bioinformatics user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web.
pepstats reads one or more protein sequences and writes an output file with various statistics on the protein properties. This includes:

Molecular weight
Number of residues
Average residue weight
Charge
Isoelectric point
For each type of amino acid: number, molar percent, DayhoffStat
For each physico-chemical class of amino acid: number, molar percent
Probability of protein expression in E. coli inclusion bodies
Molar extinction coefficient (A280)
Extinction coefficient at 1 mg/ml (A280)

About Dr. Muhammad Naveed
Dr. Muhammad Naveed obtained PhD degree in Biotechnology (Genomics & Bioinformatics) from QAU, Islamabad with distinction. He has won PhD indigenous & IRSIP scholarships from HEC. He has done Pre-Doc research from University of Ghent, Belgium. HEC awarded best PhD (IRSIP) Scholar of the year 2013 & QAU honoured him as “Distinguished Alumni” in 2017. He is doing research in Bioinformatics & Molecular Biotechnology. He has supervised 25 MSc., 30 MPhil. & 01 PhDs. He has published 51 research articles, 01 book and 03 book chapters. He has been awarded distinguished “Researcher of the Years (2016, 2018 & 2019)” by UoG and UCP.

#EmbossPepstats #EBI #PhysiochemicalAnalysis