#44 Lockdown Learning Bioinformatics-along: Bowtie2
Автор: Simon Cockell
Загружено: 2020-06-03
Просмотров: 14606
Описание:
Countdown: 0:00
Introduction: 4:54
Software installation: 13:28
FastQC redux: 33:10
Bowtie2 Index Building: 42:39
Bowtie2 Alignment: 52:15
In lesson #44 we use Bowtie2 to index a reference genome, and to align reads to that reference. We also revisit FastQC and MultiQC.
Walk through a practical introduction to bioinformatics skills with me while working from home during the Covid-19 pandemic. Aimed at wet-lab types who want to take this unique and strange opportunity to begin learning some bioinformatics.
I am going to begin at the beginning and take it nice and slow. Our first aim will be to develop the skills required to analyse and visualise a (covid-relevant) RNA-Seq dataset.
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