Tools for Tomorrow BV-BRC Influenza Reassortment February 2026
Автор: BRC Consortium
Загружено: 2026-02-17
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Описание:
BV-BRC presents their new influenza reassortment analysis service, running the USDA flu crew's TreeSort tool.
Data and links for example including presentation: https://www.bv-brc.org/workspace/publ...
TreeSort Github: https://github.com/flu-crew/TreeSort
TreeSort Citation: Markin, A., Macken, C.A., Baker, A.L., and Anderson, T.K. Revealing reassortment in influenza A viruses with TreeSort. Molecular Biology and Evolution 42(8), msaf133; doi: https://doi.org/10.1093/molbev/msaf133.
N.B. TreeSort uses TreeTime in a subroutine to infer substitution rates for segments - please also cite Sagulenko et al. 2018 doi: 10.1093/ve/vex042.
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