How to Extract Sequences from a FASTA using Python | Python for Bioinformatics for Beginners

Описание: This tutorial shows you how to extract sequences from a fasta file using the python bioinformatics package, biopython.

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Reading FASTA files with Python for beginners

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Download the example data from here
https://github.com/vappiah/bioinfodata


Chapters
01:17 Download the example data
04:22 Import Python Libraries
04:46 Read the FASTA file
07:40 Extract the sequences of interest


Python for Bioinformatics, Read FASTA files with Python
How I use BioPython to Extract ANY Sequences from a FASTA | Python for Bioinformatics

Commands used

from Bio import SeqIO
SeqIO.parse
SeqIO.write



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