Vaccine sequence Retrieval & Structural Analysis | Vaccine Design Step 1| Lec 53lDr. Muhammad Naveed

Описание: Vaccine Desing STEP 1: Sequence Retrieval and Structural Analysis
GenBank Link:    • GenBank NCBI | Bioinformatics Lecture 1 (P...  
Physiochemical analysis (ExPAsy Portparam)
   • ProtParam | Protein Physical & chemical Pr...  
Secondary structure prediction(PSIPRED tool)
   • Protein Secondary Structure Prediction | P...  
Disulfide bonding prediction (DiANNA1.1 tool)
   • Protein Disulfide  Bond Prediction | Disul...  
Antigenicity analysis (Vaxijen 2.0): http://www.ddg-pharmfac.net/vaxijen/V...
Allergenicity analysis (AllerTOP V2.0):https://www.ddg-pharmfac.net/AllerTOP/
Tertiary structure prediction (trRosetta)
   • trRosseta | Protein 3D Structure Predictio...  
NCBI Database/UniProtKB is used to retrieve the M-protein of Severe acute respiratory syndrome beta coronavirus using the accession number MT520466.

About Dr. Muhammad Naveed
(Associate Professor, Biotechnology, University of Central Punjab, Lahore)
Dr. Muhammad Naveed obtained a Ph.D. degree in Biotechnology (Genomics & Bioinformatics) from Quaid-e-Azam University, Islamabad with distinction. He has won Ph.D. indigenous & IRSIP scholarships from HEC. He has done Pre-Doc research at the University of Ghent, Belgium. HEC awarded best Ph.D. (IRSIP) Scholar of the year 2013 & QAU honored him as “Distinguished Alumni” in 2017. He is doing research projects in Bioinformatics & Molecular Biotechnology. He has supervised 45 MSc., 40 MPhil. & 01 PhD. He has published 74 Research articles with 253 impact factor and 700 citations, 01 book, and 03 book chapters. He has been awarded distinguished “Researcher of the Years (2016, 2018 & 2019)” by UoG and UCP.
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