Viral Genomic Epidemiology: From Databases and Query Engines to Interactive Dashboards| Chaoran Chen
Автор: CERI & KRISP Centre Epidemic Response & Innovation
Загружено: 2025-10-21
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Описание:
In this CERI Seminar, Chaoran Chen explores how open-source tools are transforming the way researchers manage, share, and analyze viral genomic data for infectious disease surveillance.
The talk introduces a suite of innovative software systems — LAPIS/SILO, Loculus, Pathoplexus, and GenSpectrum — that together create a scalable framework for pathogen data management and analysis.
From high-speed genomic queries to interactive dashboards, Chen demonstrates how these tools enable rapid, equitable, and global access to genomic epidemiology data — empowering scientists and public health institutions worldwide.
Seminar recorded at the Biomedical Research Institute (BMRI), Stellenbosch University
21 October 2025
Hosted by the Centre for Epidemic Response and Innovation (CERI)
#CERI #Genomics #Bioinformatics #PublicHealth #Epidemiology #OpenSource #PathogenGenomics #ViralEpidemiology #DataScience #ResearchInnovation
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