Shawn McMurtrey

Tutorial on submitting a BUSCO job with slurm.

How to use HMMER to find a gene sequence within in a full genome sequence file. Video #3.

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How to install MUSCLE as part of the HMMER bioinformatics tool on linux operating system. Video #2

How to install the HMMER bioinformatics tool on linux operating system. Video #1

BBSketch tutorial - How to make a BlobPlot to visualize contamination in a genome.

BBTools Tutorial - Check Genome Assembly for Contaminants using BBTools

Plotting BUSCO Results - Tutorial on how to plot BUSCO scores as a bar chart.

BUSCO Tutorial - How to do a basic run with BUSCO to assess completeness of genomes.

Assessing Genome Quality by Generating Assembly Stats with QUAST

How to install BUSCO on linux using wget command.

Example Run - Forest Vegetation Simulation (FVS) and Western Root Disease Model (WRDM)

Creating a RAxML phylogenetic tree using BUSCO genes. Final video Video #5.

Concatenate fasta files together for Phylogenetic tree made with BUSCO genes: Video 4

Evolutionary analysis using a Phylogenetic tree made with BUSCO genes: Video 3

Making a Phylogenetic Tree with BUSCO Genes: Video #2

Making a Phylogenetic Tree with BUSCO Genes: Video #1

Utah vs. Washington State

Forest Vegetation Simulator won't open - Fix for Windows 10

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Convert a VCF file into a data.frame for clustering algorithms in R

Forest Vegetation Simulator (FVS) - Uploading new data sheet into simulator

Creating a Plot in R on the Cluster - CGRB - OSU - Video 2

Using R on the Cluster - CGRB - Oregon State University - Video 1

Forest Vegetation Simulator (FVS) - Tutorial

5 Classes of Echinoderms with Brief Explanation of Example Species

Genus = Mollusca

7 Characteristics Shared by All Living Things Biologoy